Sub-class with functionality for model input and setup. More...

#include <SIMinput.h>

Inheritance diagram for SIMinput:

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Collaboration diagram for SIMinput:

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Classes
struct	ICInfo
	Struct holding information about an initial condition. More...

Public Types
typedef std::vector< ICInfo >	InitialCondVec
	Convenience declaration.

typedef std::vector< unsigned char >	CharVec
	Convenience declaration.

typedef std::pair< int, Vec3 >	IdxVec3
	Convenience declaration.

Public Types inherited from SIMdependency
typedef std::vector< ASMbase * >	PatchVec
	Spline patch container.

Public Member Functions
virtual	~SIMinput ()
	Empty destructor.

virtual const char **	getPrioritizedTags () const
	Returns a list of prioritized XML-tags.

bool	readTopologyOnly (const std::string &fileName)
	Reads patch topology from the specified input file. More...

int	getUniquePropertyCode (const std::string &setName, int comp=0)
	Returns a unique integer code for a Property set. More...

size_t	setVecProperty (int code, Property::Type ptype, VecFunc *field=nullptr, int pflag=-1)
	Defines a vector field property. More...

bool	setTracProperty (int code, Property::Type ptype, TractionFunc *field=nullptr)
	Defines a traction field property. More...

size_t	setPropertyType (int code, Property::Type ptype, int pindex=-1, char basis=1)
	Defines the type of a property set. More...

bool	setNeumann (const std::string &prop, const std::string &type, int ndir, int code)
	Defines a Neumann boundary condition property by parsing a string. More...

std::vector< int >	getFunctionsForElements (const std::vector< int > &elements)
	Finds the set of basis functions with support on a set of elements. More...

bool	refine (const LR::RefineData &prm)
	Refines the mesh adaptively. More...

bool	refine (const LR::RefineData &prm, Vector &sol)
	Refines the mesh adaptively. More...

bool	refine (const LR::RefineData &prm, Vectors &sol)
	Refines the mesh adaptively. More...

int	refine (const RealFunc &refC, double refTol)
	Refines the mesh based on a mesh density function. More...

bool	readPatches (std::istream &isp, const char *whiteSpace="")
	Reads patches from given input stream. More...

bool	addConnection (int mst, int slv, int mIdx, int sIdx, bool coordCheck=false, int dim=1, int thick=1)
	Connects two patches. More...

const std::vector< ASM::Interface > &	getInterfaces () const
	Obtain a const reference to model topology.

int	restartBasis (const std::string &restartFile, int restartStep)
	Handles application restarts by reading a serialized basis. More...

virtual bool	createFEMmodel (char resetNumb='y')
	Creates the computational FEM model from the spline patches. More...

virtual void	clonePatches (const PatchVec &, const std::map< int, int > &)
	Creates the computational FEM model by copying the given patches.

virtual bool	hasIC (const std::string &name) const
	Checks whether a named initial condition is present.

bool	setInitialConditions (SIMdependency *fieldHolder=nullptr)
	Sets the initial conditions. More...

virtual bool	deSerialize (const SerializeMap &)
	Deserialization support (for simulation restart).

const TopEntity &	getEntity (const std::string &name) const
	Returns reference to a named topology entity.

TopEntity &	topology (const std::string &name)
	Returns access to a named topology entity (for model generators).

const TopologySet &	getTopology () const
	Returns the whole topology set container (for testing only).

bool	getTopItemNodes (const TopItem &titem, std::vector< int > &glbNodes) const
	Returns the node numbers associated with a topological item.

IdxVec3 *	getDiscretePoint (int idx)
	Returns pointer to an indexed discrete point.

virtual std::vector< std::vector< int > >	getElmConnectivities () const
	Returns the element-to-element connectivities.

Public Member Functions inherited from SIMbase
virtual	~SIMbase ()
	The destructor frees the dynamically allocated objects.

bool	readModel (const char *fileName)
	Reads model data from the specified input file *fileName. More...

virtual void	clearProperties ()
	Initializes the property containers of the model. More...

virtual void	initForSingleStep ()
	Interface for app-specific single-step simulation initialisation.

virtual void	initForMultiStep ()
	Interface for app-specific multi-step simulation initialisation.

virtual bool	preprocessC (const IntVec &ignored, bool fixDup, double time0)
	Performs some pre-processing tasks on the FE model. More...

virtual bool	merge (SIMbase that, const std::map< int, int > old2new=nullptr, int poff=0)
	Merges the global equation system of that simulator with this. More...

bool	initSystem (LinAlg::MatrixType mType, size_t nMats=1, size_t nVec=1, size_t nScl=0, bool withRF=false)
	Allocates the system matrices of the FE problem to be solved. More...

bool	initSystem (const SIMbase *that)
	Lets this simulator share equation system with that simulator.

void	initLHSbuffers ()
	Initializes left-hand-side element matrix buffers for integrand.

bool	setAssociatedRHS (size_t iMat, size_t iVec)
	Associates a system vector to a system matrix. More...

bool	setMode (int mode, bool needIntegr=true, bool resetSol=false)
	Defines the solution mode before the element assembly is started. More...

void	setIntegrationPrm (unsigned short int i, double prm)
	Initializes an integration parameter for the integrand. More...

void	setQuadratureRule (size_t ng, bool redimBuffers=false, bool printQP=false)
	Defines the spatial numerical integration scheme to use. More...

virtual bool	printProblem () const
	Prints out problem-specific data to the log stream.

const IntegrandBase *	getProblem () const
	Returns a pointer to the problem-specific data object.

virtual ASM::InterfaceChecker *	getInterfaceChecker (size_t) const
	Returns interface checker type for model.

void	clearProblem ()
	Clears the reference to the problem-specific data object. More...

virtual std::string	getName () const
	Returns the name of this simulator. More...

virtual bool	mixedProblem () const
	Returns whether a mixed formulation is used (used by HDF5 output).

const LinSolParams *	getSolParams () const
	Returns the linear equation solver parameters (for PETSc).

virtual unsigned short int	getNoParamDim () const =0
	Returns the number of parameter dimensions in the model.

virtual size_t	getNoSpaceDim () const
	Returns the number of spatial dimensions in the model.

size_t	getNoFields (int basis=0) const
	Returns the number of primary solution fields. More...

size_t	getNoDOFs (bool subSim=false) const
	Returns the model size in terms of number of DOFs.

size_t	getNoNodes (int basis=0) const
	Returns the model size in terms of number of unique nodes. More...

size_t	getNoElms (bool includeXelms=false, bool includeZelms=false) const
	Returns the model size in terms of number of elements. More...

size_t	getNoSolutions (bool allocated=false) const
	Returns the number of solution vectors.

int	getNoPatches () const
	Returns the total number of patches in the model.

size_t	getNoEquations () const
	Returns the number of unknowns in the linear equation system.

size_t	getNoConstraints () const
	Returns the number of constraint equations in the model.

virtual size_t	getNoRHS () const
	Returns the number of right-hand-side vectors.

unsigned char	getNoBasis () const
	Returns the number of bases in the model.

char	getNodeType (int inod) const
	Returns the type (DOF classification) of the specified global node.

Vec4	getNodeCoord (int inod) const
	Returns the spatial coordinates of the specified global node.

bool	isFixed (int inod, int dof=123) const
	Returns true if all DOFs in the specified global node are fixed.

int	getGlobalNode (int node) const
	Returns the global node number from a process-local node number.

int	getLocalNode (int node) const
	Returns the process-local node number from a global node number.

bool	getElmNodes (IntVec &mnpc, int iel) const
	Finds the Matrix of Nodal Point Correspondance for element iel.

void	getBoundaryNodes (int pcode, IntVec &glbNodes, std::vector< Vec3 > *XYZ=nullptr) const
	Finds the list of global nodes associated with a boundary. More...

int	findClosestNode (const Vec3 &) const
	Finds the node that is closest to the given point X.

IntVec	getNodeSet (const std::string &setName) const
	Returns a predefined node set. More...

bool	initDirichlet (double time=0.0)
	Initializes time-dependent in-homogeneous Dirichlet coefficients. More...

bool	hasTimeDependentDirichlet () const
	Checks for time-dependent in-homogeneous Dirichlet conditions.

virtual bool	updateDirichlet (double time=0.0, const Vector *prevSol=nullptr)
	Updates the time-dependent in-homogeneous Dirichlet coefficients. More...

virtual bool	updateConfiguration (const Vector &)
	Updates problem-dependent state based on the current solution.

virtual bool	updateRotations (const RealArray &, double=0.0)
	Updates the nodal rotations for problems with rotational DOFs.

bool	updateGrid (const RealArray &displ)
	Updates the grid coordinates. More...

bool	updateGrid (const std::string &field)
	Updates the grid coordinates. More...

void	setRefined (int nref)
	Sets the refinement status (for restart of adaptive simulations). More...

int	getRefined () const
	Returns current refinement status.

bool	hasElementActivator () const
	Returns true if an element activation function is specified.

void	updateForNewElements (Vector &solution, const TimeDomain &time) const
	Modifies the current solution vector when activating elements. More...

virtual bool	assembleSystem (const TimeDomain &time, const Vectors &prevSol, bool newLHSmatrix=true, bool poorConvg=false)
	Administers assembly of the linear equation system. More...

bool	assembleSystem (double t0=0.0, const Vectors &pSol=Vectors())
	Administers assembly of the linear equation system. More...

bool	extractLoadVec (Vector &loadVec, size_t idx=0, const char *hd=nullptr) const
	Extracts the assembled load vector for inspection/visualization. More...

bool	extractScalars (RealArray &values) const
	Extracts the assembled global scalar quantities.

double	extractScalar (size_t idx=0) const
	Extracts an assembled global scalar quantity.

bool	applyDirichlet (Vector &glbVec) const
	Applies the Dirichlet conditions to given vector. More...

bool	solveEqSystem (Vector &solution, size_t idxRHS, double rCond, int printSol=0, bool dumpEqSys=false, const char compName="displacement")
	Solves the assembled linear system of equations for a given load. More...

virtual bool	solveSystem (Vector &solution, int printSol, double rCond, const char compName="displacement", size_t idxRHS=0)
	Solves the assembled linear system of equations for a given load. More...

bool	solveSystem (Vector &solution, int printSol=0, const char *compName="displacement")
	Solves the assembled linear system of equations for a given load. More...

bool	solveSystem (Vectors &solution, int printSol=0, const char *cmpName="displacement")
	Solves a linear system of equations with multiple right-hand-sides. More...

void	getWorstDofs (const Vector &x, const Vector &r, size_t nWorst, double eps, int iteNorm, std::map< std::pair< int, int >, RealArray > &worst) const
	Finds the DOFs showing the worst convergence behavior. More...

virtual void	iterationNorms (const Vector &x, const Vector &r, double &eNorm, double &rNorm, double &dNorm) const
	Evaluates some iteration norms for convergence assessment. More...

double	solutionNorms (const Vector &x, double inf=nullptr, size_t ind=nullptr, size_t nf=0, char type='D') const
	Evaluates some norms of the primary solution vector. More...

bool	solutionNorms (const TimeDomain &time, const Vectors &psol, const Vectors &ssol, Vectors &gNorm, Matrix eNorm=nullptr, const char name=nullptr)
	Integrates some solution norm quantities. More...

bool	solutionNorms (const TimeDomain &time, const Vectors &psol, Vectors &gNorm, Matrix *eNorm=nullptr)
	Integrates some solution norm quantities. More...

bool	solutionNorms (const Vector &psol, const Vectors &ssol, Matrix &eNorm, Vectors &gNorm, const char *name=nullptr)
	Integrates some solution norm quantities. More...

bool	solutionNorms (const Vector &psol, Matrix &eNorm, Vectors &gNorm)
	Integrates some solution norm quantities. More...

bool	solutionNorms (const Vector &psol, const Vectors &ssol, Vectors &gNorm, const char *name=nullptr)
	Integrates some solution norm quantities. More...

virtual void	printStep (int istep, const TimeDomain &time) const
	Prints out load/time step identification. More...

virtual void	printSolutionSummary (const Vector &solution, int printSol=0, const char *compName=nullptr, std::streamsize outPrec=0)
	Prints a summary of the calculated solution to std::cout. More...

bool	getCurrentReactions (RealArray &RF, const Vector &psol, int pcode=0) const
	Computes the total reaction forces in the model. More...

bool	haveReactions (int pcode=0) const
	Checks for total reaction forces associated with a boundary. More...

virtual const RealArray *	getReactionForces () const
	Returns current reaction force container.

bool	systemModes (std::vector< Mode > &solution, int nev, int ncv, int iop, double shift, size_t iA=0, size_t iB=1)
	Performs a generalized eigenvalue analysis of the assembled system. More...

bool	systemModes (std::vector< Mode > &solution, size_t iA=0, size_t iB=1)
	Performs a generalized eigenvalue analysis of the assembled system. More...

virtual bool	haveBoundaryReactions (bool=false) const
	Returns whether reaction forces are to be computed or not.

bool	assembleForces (const Vector &solution, double t0, RealArray R, Vector S=nullptr)
	Assembles reaction and interface forces for specified boundaries. More...

virtual bool	project (Matrix &ssol, const Vector &psol, SIMoptions::ProjectionMethod method=SIMoptions::GLOBAL, const TimeDomain &time=TimeDomain()) const
	Projects the secondary solution associated with a primary solution. More...

bool	project (Vector &ssol, const Vector &psol, SIMoptions::ProjectionMethod method=SIMoptions::GLOBAL, size_t iComp=0) const
	Projects the secondary solution associated with a primary solution. More...

bool	projectAnaSol (Vector &ssol, SIMoptions::ProjectionMethod method) const
	Projects the analytical secondary solution, if any. More...

bool	project (RealArray &values, const FunctionBase *f, int basis=1, int iField=0, int nFields=1, SIMoptions::ProjectionMethod method=SIMoptions::GLOBAL, double time=0.0) const
	Projects a function onto the specified basis. More...

bool	evalSecondarySolution (Matrix &field, int pindx) const
	Evaluates the secondary solution field for specified patch. More...

virtual bool	fieldProjections () const
	Returns whether projections must be handled through fields or not.

virtual bool	haveAnaSol () const
	Returns whether an analytical solution is available or not.

virtual bool	haveDualSol () const
	Returns whether a dual solution is available or not.

NormBase *	getNormIntegrand () const
	Returns a pointer to a norm integrand object for this simulator. More...

ForceBase *	getBoundaryForceIntegrand (const Vec3 *X0=nullptr) const
	Returns a pointer to a force integrand object for this simulator. More...

ForceBase *	getNodalForceIntegrand () const
	Returns a pointer to a force integrand object for this simulator. More...

const SAM *	getSAM () const
	Returns a const pointer to the SAM object of this simulator.

void	registerDependency (const std::string &name, SIMdependency *sim, short int nvc=1, unsigned char basis=1)
	Registers a dependency on a field from another SIM object. More...

bool	extractPatchSolution (const Vectors &sol, size_t pindx) const
	Extracts all local solution vector(s) for a specified patch. More...

size_t	extractPatchSolution (const RealArray &sol, RealArray &vec, const ASMbase *pch, unsigned char nndof=0, unsigned char basis=0) const
	Extracts a local solution vector for a specified patch. More...

bool	injectPatchSolution (RealArray &sol, const RealArray &vec, const ASMbase *pch, unsigned char nndof=0, unsigned char basis=0) const
	Injects a patch-wise solution vector into the global vector. More...

bool	extractPatchElmRes (const Matrix &glbRes, Matrix &elRes, int pindx) const
	Extracts element results for a specified patch. More...

int	getLocalPatchIndex (int patchNo) const
	Returns the local patch index for the given global patch number. More...

const PatchVec &	getFEModel () const
	Returns a const reference to our FEM model.

ASMbase *	getPatch (int idx, bool glbIndex=false) const
	Returns a pointer to a specified patch of our FEM model. More...

bool	setPatchMaterial (size_t patch) const
	Initializes material properties for the given patch.

const std::map< int, int > &	getGlob2LocMap () const
	Returns a const reference to our global-to-local node mapping.

PropertyVec::const_iterator	begin_prop () const
	Returns the beginning of the property array.

PropertyVec::const_iterator	end_prop () const
	Returns the end of the property array.

SystemMatrix *	getRayleighDampingMatrix (size_t iM=1, size_t iK=0) const
	Returns current Rayleigh system damping matrix. More...

SystemMatrix *	getLHSmatrix (size_t idx=0, bool copy=false) const
	Returns current system left-hand-side matrix.

SystemVector *	getRHSvector (size_t idx=0, bool copy=false) const
	Returns current system right-hand-side vector.

void	addToRHSvector (size_t idx, const SystemVector &vec, double scale=1.0)
	Adds a system vector to the given right-hand-side vector.

RealFunc *	getSclFunc (int code) const
	Returns a scalar function associated with code.

void	setMDflag (char flag)
	Sets the multi-dimension simulator sequence flag.

bool	isFirst () const
	Returns true, if this is the equation system owner.

void	dumpEqSys (bool initialBlankLine=false)
	Dumps left-hand-side matrix and right-hand-side vector to file.

void	dumpSolVec (const Vector &x, bool isExpanded=true, bool expOnly=false)
	Dumps a solution vector to file.

virtual int	printNRforces (const IntVec &={}) const
	Prints out nodal reaction forces to the log stream.

virtual void	registerDependency (SIMdependency *sim, const std::string &name, short int nvc, const PatchVec &patches, char diffBasis=0, int component=1)
	Registers a dependency on a field from another SIM object. More...

virtual void	registerDependency (SIMdependency sim, const std::string &name, short int nvc, const PatchVec &patches, const int MADOF)
	Registers a dependency on a field from another SIM object. More...

virtual void	registerDependency (SIMdependency *sim, const std::string &name, short int nvc=1)
	Registers a dependency on a field from another SIM object. More...

Public Member Functions inherited from SIMadmin
virtual	~SIMadmin ()
	Empty destructor.

virtual bool	read (const char *fileName)
	Reads model data from the specified input file *fileName.

virtual bool	preprocess (const IntVec &ignored={}, bool fixDup=false)
	Performs some pre-processing tasks on the FE model.

const ProcessAdm &	getProcessAdm () const
	Returns the parallel process administrator.

int	getGlobalProcessID () const
	Returns the global process ID. More...

const std::string &	getHeading () const
	Returns the simulator heading.

void	setHeading (const std::string &heading)
	Defines the simulator heading.

void	printHeading (int &supStep) const
	Prints the heading of this simulator, if any, to IFEM::cout.

Public Member Functions inherited from XMLInputBase
bool	readXML (const char *fileName, bool verbose=true)
	Reads an XML input file. More...

bool	loadXML (const char *xml)
	Loads data from an XML-formatted text string. More...

Public Member Functions inherited from SIMdependency
virtual	~SIMdependency ()
	Empty destructor.

virtual void	registerDependency (SIMdependency *sim, const std::string &name, short int nvc, const PatchVec &patches, char diffBasis=0, int component=1)
	Registers a dependency on a field from another SIM object. More...

virtual void	registerDependency (SIMdependency sim, const std::string &name, short int nvc, const PatchVec &patches, const int MADOF)
	Registers a dependency on a field from another SIM object. More...

virtual void	registerDependency (SIMdependency *sim, const std::string &name, short int nvc=1)
	Registers a dependency on a field from another SIM object. More...

bool	fillField (const std::string &name, const std::vector< double > &values)
	Initializes the nodal vector of named field in this SIM.

virtual std::vector< double > *	getField (const std::string &name)
	Returns the nodal vector of named field in this SIM.

virtual const std::vector< double > *	getField (const std::string &name) const
	Returns the nodal vector of named field in this SIM.

const std::vector< double > *	getDependentField (const std::string &name) const
	Returns the nodal vector of named field in a dependent SIM.

ASMbase *	getDependentPatch (const std::string &name, int pindx) const
	Returns a spline patch associated with a dependent field.

void	registerField (const std::string &name, const std::vector< double > &vec)
	Registers a named field with associated nodal vector in this SIM.

Protected Types
typedef std::map< std::string, std::string >	SerializeMap
	Convenience type.

Protected Types inherited from SIMbase
typedef std::map< int, RealFunc * >	SclFuncMap
	Scalar field container.

typedef std::map< int, VecFunc * >	VecFuncMap
	Vector field container.

typedef std::map< int, TractionFunc * >	TracFuncMap
	Traction field container.

typedef std::multimap< int, IntegrandBase * >	IntegrandMap
	Property code to integrand map.

Protected Types inherited from SIMadmin
using	IntVec = std::vector< int >
	Convenience alias.

Protected Member Functions
	SIMinput (IntegrandBase *itg)
	The constructor just forwards to the base class constructor.

virtual bool	parse (char *keyWord, std::istream &is)
	Parses a data section from an input stream. More...

virtual bool	parse (const tinyxml2::XMLElement *elem)
	Parses a data section from an XML document. More...

virtual bool	parseGeometryDimTag (const tinyxml2::XMLElement *elem)=0
	Parses a dimension-specific subelement of the geometry XML-tag.

bool	parsePeriodic (const tinyxml2::XMLElement *elem)
	Parses the periodic XML-tag. More...

virtual bool	parseOutputTag (const tinyxml2::XMLElement *elem)
	Parses a subelement of the resultoutput XML-tag.

FunctionBase *	parseDualTag (const tinyxml2::XMLElement *elem, int ftype=1)
	Parses the dualfield tag.

int	parseMaterialSet (const tinyxml2::XMLElement *elem, int mindex)
	Parses the "set" attribute of a material XML-tag. More...

bool	parseTopologySet (const tinyxml2::XMLElement *elem, std::vector< int > &patches) const
	Parses the "set" attribute of a refine/raiseorder XML-tag. More...

bool	parsePatchList (const tinyxml2::XMLElement *elem, std::vector< int > &patches) const
	Parses a list of patch indices from an XML-tag. More...

bool	createPropertySet (const std::string &setName, int pc)
	Creates a set of Property objects. More...

virtual ASMbase *	readPatch (std::istream &isp, int pchInd, const CharVec &unf=CharVec(), const char *whiteSpace="") const =0
	Reads a patch from given input stream. More...

virtual bool	readNodes (std::istream &isn, int pchInd, int basis=0, bool oneBased=false)
	Reads global node data for a patch from given input stream. More...

virtual void	readNodes (std::istream &isn)
	Reads node numbers from given input stream. More...

virtual ModelGenerator *	getModelGenerator (const tinyxml2::XMLElement *geo) const =0
	Instantiates a FEM model generator. More...

virtual bool	connectPatches (const ASM::Interface &ifc, bool coordCheck)=0
	Connects two patches. More...

bool	saveBasis (SerializeMap &data) const
	Writes current basis to a serialization container. More...

bool	restoreBasis (const SerializeMap &data)
	Restores the basis from a serialization container. More...

Protected Member Functions inherited from SIMbase
	SIMbase (IntegrandBase *itg)
	The constructor initializes the pointers to dynamic data members.

VecFunc *	getVecFunc (size_t patch, Property::Type ptype) const
	Returns a vector function associated with given patch and property. More...

virtual bool	addConstraint (int patch, int lndx, int ldim, int dirs, int code, int &ngnod, char basis=1, bool ovrD=false)
	Preprocesses a user-defined Dirichlet boundary property. More...

virtual void	preprocessA ()
	Preprocessing performed before the FEM model generation.

virtual bool	preprocessBeforeAsmInit (int &)
	Specialized preprocessing performed before assembly initialization.

virtual bool	preprocessB ()
	Preprocessing performed after the system assembly initialization.

virtual void	preprocessResultPoints ()=0
	Preprocesses the result sampling points.

int	renumberNodes (bool renumMNPC=false)
	Renumbers the global node numbers after resolving patch topology. More...

virtual bool	renumberNodes (const std::map< int, int > &)
	Interface for renumbering of app-specific node number tables.

virtual bool	extractPatchSolution (IntegrandBase *problem, const Vectors &sol, size_t pindx) const
	Extracts all local solution vector(s) for a specified patch. More...

char	getMDflag () const
	Returns the multi-dimension simulator sequence flag.

virtual void	shiftGlobalNums (int, int)
	Shifts global node and element numbers by constant offsets.

virtual bool	initMaterial (size_t)
	Initializes material properties for integration of interior terms.

virtual bool	initBodyLoad (size_t)
	Initializes the body load properties for current patch.

virtual bool	initNeumann (size_t)
	Initializes for integration of Neumann terms for a given property.

virtual bool	assembleDiscreteTerms (const IntegrandBase *, const TimeDomain &)
	Assembles problem-dependent discrete terms, if any.

virtual bool	assembleDiscreteItems (const IntegrandBase *itg, const TimeDomain &time, const Vectors &)
	Assembles problem-dependent discrete terms, if any. More...

virtual double	externalEnergy (const Vectors &psol, const TimeDomain &) const
	Computes (possibly problem-dependent) external energy contribution.

virtual bool	postProcessNorms (Vectors &, Matrix *)
	Applies app-specific post-processing on norms.

void	generateThreadGroups (const Property &p, bool silence=false)
	Generates element groups for multi-threading of boundary integrals. More...

void	changeNumThreads ()
	Called if number of threads changes.

bool	addMADOF (unsigned char basis, unsigned char nndof, bool other=true)
	Adds a MADOF with an extraordinary number of DOFs on a given basis. More...

double *	theExtEnerg ()
	Returns a pointer to the external energy path integral value.

const double *	getExtEnerg () const
	Returns a const pointer to the external energy path integral value.

Protected Member Functions inherited from SIMadmin
	SIMadmin (const char *heading=nullptr)
	The default constructor initializes the process administrator.

	SIMadmin (SIMadmin &anotherSIM)
	Copy constructor.

Protected Member Functions inherited from XMLInputBase
const tinyxml2::XMLElement *	loadFile (tinyxml2::XMLDocument &doc, const char *fileName, bool verbose=false)
	Loads an XML input file into a tinyxml2::XMLDocument object. More...

Protected Member Functions inherited from SIMdependency
	SIMdependency ()
	The constructor is protected to allow sub-class instances only.

bool	extractPatchDependencies (IntegrandBase *problem, const PatchVec &model, size_t pindx) const
	Extracts local solution vector(s) for all dependent fields. More...

Static Protected Member Functions
static std::istream *	getPatchStream (const char tag, const char patch)
	Helper method returning a stream for patch geometry input. More...

Protected Attributes
ModelGenerator *	myGen
	Model generator.

TopologySet	myEntitys
	Set of named topological entities.

std::vector< IdxVec3 >	myTopPts
	Discrete points not belonging to any patch.

std::vector< ASM::Interface >	myInterfaces
	Topology interface descriptions.

std::map< std::string, InitialCondVec >	myICs
	Initial condition definitions.

Protected Attributes inherited from SIMbase
unsigned char	nsd
	Number of spatial dimensions.

PatchVec	myModel
	The actual NURBS/spline model.

PropertyVec	myProps
	Physical property mapping.

SclFuncMap	myScalars
	Scalar property fields.

VecFuncMap	myVectors
	Vector property fields.

TracFuncMap	myTracs
	Traction property fields.

IntegrandBase *	myProblem
	The main integrand of this simulator.

IntegrandMap	myInts
	Set of all integrands involved.

AnaSol *	mySol
	Analytical/Exact solution.

FunctionBase *	dualField
	Dual solution field (extraction function)

std::vector< FunctionBase * >	extrFunc
	Extraction functions for VCP.

int	nGlbNodes
	Total number of unique nodes in the model. More...

int	isRefined
	Indicates if the model is adaptively refined.

bool	lagMTOK
	Indicates if global multipliers is OK with multithreading.

bool	fixZeros
	If true, constrain zero pivots before solving.

std::vector< DumpData >	lhsDump
	Coefficient matrix dump specifications.

std::vector< DumpData >	rhsDump
	Right-hand-side vector dump specifications.

std::vector< DumpData >	solDump
	Solution vector dump specifications.

int	nGlPatches
	Number of global patches.

IntVec	myPatches
	Global patch numbers for current processor.

IntVec	myLoc2Glb
	Local-to-global node number mapping.

std::map< int, int >	myGlb2Loc
	Global-to-local node number mapping.

const std::map< int, int > *	g2l
	Pointer to global-to-local node mapping.

std::map< int, int >	myDegenElm
	Degenerated elements mapping.

std::set< int >	myDupNodes
	Set of duplicated nodes.

AlgEqSystem *	myEqSys
	The actual linear equation system.

SAM *	mySam
	Auxiliary data for FE assembly management.

LinSolParams *	mySolParams
	Input parameters for PETSc.

LinSolParams *	myGl2Params
	Input parameters for PETSc, for L2 projection.

Protected Attributes inherited from SIMadmin
ProcessAdm	adm
	Parallel administrator.

int	myPid
	Processor ID in parallel simulations.

int	nProc
	Number of processors in parallel simulations.

std::string	myHeading
	Heading written before reading the input file.

Private Member Functions
bool	parseGeometryTag (const tinyxml2::XMLElement *elem)
	Parses a subelement of the geometry XML-tag.

bool	parseBCTag (const tinyxml2::XMLElement *elem)
	Parses a subelement of the boundaryconditions XML-tag.

bool	parseICTag (const tinyxml2::XMLElement *elem)
	Parses the initialconditions XML-tag.

bool	parseLinSolTag (const tinyxml2::XMLElement *elem)
	Parses a subelement of the linearsolver XML-tag.

bool	setInitialCondition (SIMdependency *fieldHolder, const std::string &fileName, const InitialCondVec &info)
	Sets initial conditions from a file. More...

Private Attributes
bool	isReading
	If true, we are reading multiple patch tags.

bool	isSaved
	If true, the basis has been serialized.

Additional Inherited Members
Public Attributes inherited from SIMadmin
SIMoptions &	opt
	Simulation control parameters.

Static Public Attributes inherited from SIMbase
static bool	ignoreDirichlet = false
	Set to true for free vibration analysis.

static bool	preserveNOrder = false
	Set to true to preserve node ordering.

Static Public Attributes inherited from SIMadmin
static int	msgLevel = 2
	Controls the console output amount during solving.

Detailed Description

Sub-class with functionality for model input and setup.

This class extends the SIMbase class with some added functionalities for reading model definitions from input file. This also includes reading initial conditions from HDF5-files and adaptive refinement. These items are put in a separate sub-class to hide them away from the SIMbase class, which contains the actual simulation driver (i.e., the computational methods).

Member Function Documentation

◆ addConnection()

bool SIMinput::addConnection	(	int	mst,
		int	slv,
		int	mIdx,
		int	sIdx,
		bool	coordCheck = `false`,
		int	dim = `1`,
		int	thick = `1`
	)

inline

Connects two patches.

Parameters

[in]	mst	Master patch
[in]	slv	Slave patch
[in]	mIdx	Boundary index on master patch
[in]	sIdx	Boundary index on slave patch
[in]	coordCheck	If true, check for matching coordinates
[in]	dim	Dimensionality of connection
[in]	thick	Thickness of connection

References connectPatches().

Referenced by MultiPatchModelGenerator1D::createTopology(), MultiPatchModelGenerator2D::createTopology(), and MultiPatchModelGenerator3D::createTopology().

◆ connectPatches()

virtual bool SIMinput::connectPatches	(	const ASM::Interface &	ifc,
		bool	coordCheck
	)

protectedpure virtual

Connects two patches.

Parameters

[in]	ifc	Patch interface definition
[in]	coordCheck	If false, do not check for matching coordinates

Implemented in SIM1D, SIM3D, SIM2D, and SIMdummy< SIMgeneric >.

Referenced by addConnection().

◆ createFEMmodel()

bool SIMinput::createFEMmodel ( char resetNumb = 'y' )

virtual

Creates the computational FEM model from the spline patches.

Parameters

[in] resetNumb If 'y', start element and node numbers from zero

Implements SIMbase.

Reimplemented in SIMdummy< SIMgeneric >, and SIMsupel.

References IFEM::cout, SIMbase::myModel, SIMoptions::nGauss, SIMadmin::opt, ASMbase::resetNumbering(), and ASMbase::setGlobalNodeNums().

Referenced by SIMsupel::createFEMmodel(), MultiPatchModelGenerator1D::createTopology(), MultiPatchModelGenerator2D::createTopology(), MultiPatchModelGenerator3D::createTopology(), SIM1D::parse(), SIM2D::parse(), SIM3D::parse(), parse(), SIM1D::parseBCTag(), SIM2D::parseBCTag(), SIM3D::parseBCTag(), SIM1D::parseGeometryTag(), SIM2D::parseGeometryTag(), and SIM3D::parseGeometryTag().

◆ createPropertySet()

bool SIMinput::createPropertySet	(	const std::string &	setName,
		int	pc
	)

protected

Creates a set of Property objects.

Parameters

[in]	setName	Name of the topology set the property is defined on
[in]	pc	The property code to be associated with this set

References TopItem::idim, TopItem::item, myEntitys, SIMbase::myProps, and TopItem::patch.

Referenced by getUniquePropertyCode().

◆ getFunctionsForElements()

IntVec SIMinput::getFunctionsForElements ( const std::vector< int > & elements )

Finds the set of basis functions with support on a set of elements.

Parameters

[in] elements 0-based element indices

Returns: 0-based node indices with support on the given elements

References ASMLRSpline::getFunctionsForElements(), and SIMbase::myModel.

Referenced by refine().

◆ getModelGenerator()

virtual ModelGenerator* SIMinput::getModelGenerator ( const tinyxml2::XMLElement * geo ) const

protectedpure virtual

Instantiates a FEM model generator.

Parameters

[in] geo XML element containing geometry definition

Implemented in SIM3D, SIM2D, SIM1D, and SIMdummy< SIMgeneric >.

Referenced by SIMgeneric::createDefaultModel(), and parse().

◆ getPatchStream()

std::istream * SIMinput::getPatchStream	(	const char *	tag,
		const char *	patch
	)

staticprotected

Helper method returning a stream for patch geometry input.

Parameters

[in]	tag	The XML-tag containing the patch geometry definition
[in]	patch	The value of the tag, either a file name or g2 string

References IFEM::cout.

Referenced by SIM1D::parseGeometryTag(), SIM2D::parseGeometryTag(), SIM3D::parseGeometryTag(), and parseGeometryTag().

◆ getUniquePropertyCode()

int SIMinput::getUniquePropertyCode	(	const std::string &	setName,
		int	comp = `0`
	)

Returns a unique integer code for a Property set.

Parameters

[in]	setName	Name of the topology set the property is defined on
[in]	comp	The solution components on which the property is applied

The actual Property objects are also created (one for each entity in the topology set) and their type is set to UNDEFINED. The method setPropertyType must be used to assign the actual Property type.

References createPropertySet(), and SIMbase::myProps.

Referenced by parseBCTag(), and parseMaterialSet().

◆ parse() [1/2]

bool SIMinput::parse	(	char *	keyWord,
		std::istream &	is
	)

protectedvirtual

Parses a data section from an input stream.

Parameters

[in]	keyWord	Keyword of current data section to read
	is	The file stream to read from

Reimplemented from SIMadmin.

Reimplemented in SIMoutput, SIM3D, SIM2D, and SIM1D.

References IFEM::cout, createFEMmodel(), SIMoptions::format, SIMbase::getLocalPatchIndex(), SIMbase::getNoParamDim(), SIMbase::ignoreDirichlet, Property::ldim, Property::lindx, SIMbase::myModel, SIMbase::myPatches, SIMadmin::myPid, SIMbase::myProps, SIMbase::myScalars, SIMbase::nGlPatches, SIMadmin::opt, utl::parseRealFunc(), Property::patch, Property::pindx, utl::readLine(), readNodes(), readPatch(), readPatches(), SIMoptions::saveInc, and setPropertyType().

Referenced by SIMoutput::parse().

◆ parse() [2/2]

bool SIMinput::parse ( const tinyxml2::XMLElement * elem )

protectedvirtual

Parses a data section from an XML document.

Parameters

[in] elem The XML element to parse

Reimplemented from SIMadmin.

Reimplemented in SIMsupel, SIM3D, SIM2D, and SIM1D.

References ModelGenerator::createGeometry(), ModelGenerator::createTopologySets(), SIMoptions::eig, SIMbase::fixZeros, utl::getAttribute(), IntegrandBase::getLinearSystemType(), getModelGenerator(), SIMbase::lhsDump, GlbL2::MatrixType, ASMbase::modelSize, myGen, SIMbase::myGl2Params, SIMbase::myModel, SIMbase::myPatches, SIMbase::myProblem, SIMbase::mySolParams, SIMbase::nGlPatches, noDumpDataYet, SIMadmin::opt, SIMadmin::parse(), parseBCTag(), SIMoptions::parseConsoleTag(), SIMoptions::parseDiscretizationTag(), SIMoptions::parseEigSolTag(), parseGeometryTag(), parseICTag(), parseLinSolTag(), parseOutputTag(), SIMoptions::parseRestartTag(), LinAlg::PETSC, LinSolParams::read(), SIMbase::rhsDump, SIMoptions::setLinearSolver(), GlbL2::SolverParams, LinAlg::SYMMETRIC, and LinAlg::UMFPACK.

◆ parseMaterialSet()

int SIMinput::parseMaterialSet	(	const tinyxml2::XMLElement *	elem,
		int	mindex
	)

protected

Parses the "set" attribute of a material XML-tag.

Parameters

[in]	elem	The XML element extract the set name from
[in]	mindex	Index into problem-dependent material property container

Returns: The property code to be associated with the material

References utl::getAttribute(), getUniquePropertyCode(), and setPropertyType().

◆ parsePatchList()

bool SIMinput::parsePatchList	(	const tinyxml2::XMLElement *	elem,
		std::vector< int > &	patches
	)		const

protected

Parses a list of patch indices from an XML-tag.

Parameters

[in]	elem	The XML element extract the patch indices from
[in]	patches	List of patch indices

References utl::getAttribute(), SIMbase::myModel, and SIMbase::nGlPatches.

Referenced by parseTopologySet().

◆ parsePeriodic()

bool SIMinput::parsePeriodic ( const tinyxml2::XMLElement * elem )

protected

Parses the periodic XML-tag.

This method can not be part of the SIMinput::parseGeometryTag() method, since the periodicities must be processed after the patches have been order-elevated and/or refined. The method is instead invoked from the dimension-specific sub-classes which handle the refinements.

References ASMbase::closeBoundaries(), IFEM::cout, utl::getAttribute(), SIMbase::getPatch(), and SIMbase::nGlPatches.

Referenced by SIM1D::parseGeometryTag(), SIM2D::parseGeometryTag(), and SIM3D::parseGeometryTag().

◆ parseTopologySet()

bool SIMinput::parseTopologySet	(	const tinyxml2::XMLElement *	elem,
		std::vector< int > &	patches
	)		const

protected

Parses the "set" attribute of a refine/raiseorder XML-tag.

Parameters

[in]	elem	The XML element extract the set name from
[in]	patches	List of patch indices of the specified set

References utl::getAttribute(), TopItem::idim, myEntitys, parsePatchList(), and TopItem::patch.

Referenced by SIM1D::parseGeometryTag(), SIM2D::parseGeometryTag(), and SIM3D::parseGeometryTag().

◆ readNodes() [1/2]

virtual void SIMinput::readNodes ( std::istream & isn )

inlineprotectedvirtual

Reads node numbers from given input stream.

Parameters

[in] isn The input stream to read from

Reimplemented in SIM3D, and SIM2D.

◆ readNodes() [2/2]

virtual bool SIMinput::readNodes	(	std::istream &	isn,
		int	pchInd,
		int	basis = `0`,
		bool	oneBased = `false`
	)

inlineprotectedvirtual

Reads global node data for a patch from given input stream.

Parameters

[in]	isn	The input stream to read from
[in]	pchInd	0-based index of the patch to read node data for
[in]	basis	The basis to read node data for (when mixed FEM, 0 = all)
[in]	oneBased	If true the read node numbers are assumed one-based. If false they are assumed to be zero-based.

Reimplemented in SIM3D, and SIM2D.

Referenced by parse().

◆ readPatch()

virtual ASMbase* SIMinput::readPatch	(	std::istream &	isp,
		int	pchInd,
		const CharVec &	unf = `CharVec()`,
		const char *	whiteSpace = `""`
	)		const

protectedpure virtual

Reads a patch from given input stream.

Parameters

[in]	isp	The input stream to read from
[in]	pchInd	0-based index of the patch to read
[in]	unf	Number of unknowns per basis function for each field
[in]	whiteSpace	For message formatting

Implemented in SIM3D, SIM2D, SIM1D, SIMsupel, and SIMdummy< SIMgeneric >.

Referenced by parse(), readPatches(), and setInitialCondition().

◆ readPatches()

bool SIMinput::readPatches	(	std::istream &	isp,
		const char *	whiteSpace = `""`
	)

Reads patches from given input stream.

Parameters

[in]	isp	The input stream to read from
[in]	whiteSpace	For message formatting

References IFEM::cout, SIMbase::getLocalPatchIndex(), ASMbase::getNoSpaceDim(), SIMbase::myModel, SIMbase::nsd, and readPatch().

Referenced by MultiPatchModelGenerator1D::createGeometry(), MultiPatchModelGenerator2D::createGeometry(), MultiPatchModelGenerator3D::createGeometry(), ModelGenerator::createGeometry(), parse(), and parseGeometryTag().

◆ readTopologyOnly()

bool SIMinput::readTopologyOnly ( const std::string & fileName )

Reads patch topology from the specified input file.

Parameters

[in] fileName Path to XML file to read patch topology from

This method is typically invoked by coupled simulators using shared grids. It is then invoked for the simulator that owns the grid to resolve the patch topology, in case the other simulators using the grid invokes SIMbase::preprocess() first.

References XMLInputBase::loadFile(), SIMbase::nGlbNodes, parseGeometryDimTag(), and SIMbase::renumberNodes().

◆ refine() [1/4]

bool SIMinput::refine ( const LR::RefineData & prm )

Refines the mesh adaptively.

Parameters

[in] prm Input data used to control the refinement

Referenced by AdaptiveSIM::adaptMesh(), SIM1D::parse(), and refine().

◆ refine() [2/4]

bool SIMinput::refine	(	const LR::RefineData &	prm,
		Vector &	sol
	)

Refines the mesh adaptively.

Parameters

[in]	prm	Input data used to control the refinement
[in]	sol	Vector to interpolate onto refined mesh

References utl::vector< T >::empty(), refine(), and utl::vector< T >::swap().

◆ refine() [3/4]

bool SIMinput::refine	(	const LR::RefineData &	prm,
		Vectors &	sol
	)

Refines the mesh adaptively.

Parameters

[in]	prm	Input data used to control the refinement
[in]	sol	Vectors to interpolate onto refined mesh

References LR::RefineData::elements, LR::RefineData::errors, SIMbase::extractPatchSolution(), SIMbase::getNoNodes(), SIMbase::getPatch(), SIMbase::isRefined, isSaved, ASMbase::isShared(), LR::RefineData::MLGN, SIMbase::myModel, SIMbase::nGlPatches, and refine().

◆ refine() [4/4]

int SIMinput::refine	(	const RealFunc &	refC,
		double	refTol
	)

Refines the mesh based on a mesh density function.

Parameters

[in]	refC	Mesh refinement criteria function
[in]	refTol	Mesh refinement threshold

Returns: Positive value on refinement, negative value on error, zero if no elements are refined

Refines all elements for which refC(X0) < refTol, where X0 is the element center.

References LR::RefineData::elements, ASMbase::generateFEMTopology(), ASMunstruct::getElementCenter(), ASMbase::getElmID(), getFunctionsForElements(), ASMbase::getNoElms(), SIMbase::isRefined, SIMbase::myModel, SIMbase::nGlPatches, LR::RefineData::options, refine(), and ASMbase::resetNumbering().

◆ restartBasis()

int SIMinput::restartBasis	(	const std::string &	restartFile,
		int	restartStep
	)

Handles application restarts by reading a serialized basis.

Parameters

[in]	restartFile	Path to file to read restart basis from
[in]	restartStep	Index of the time step to read restart basis for

Returns: One-based index of the first time step to solve after restart. If zero, no restart specified. If one, no serialized basis stored. If negative, read failure.

References IFEM::cout, SIMbase::getName(), HDF5Restart::readData(), and restoreBasis().

◆ restoreBasis()

bool SIMinput::restoreBasis ( const SerializeMap & data )

protected

Restores the basis from a serialization container.

Parameters

[in] data Container for serialized data

References IFEM::cout, SIMbase::getName(), SIMbase::isRefined, SIMbase::myModel, SIMbase::myPatches, and SIMbase::nGlPatches.

Referenced by restartBasis().

◆ saveBasis()

bool SIMinput::saveBasis ( SerializeMap & data ) const

protected

Writes current basis to a serialization container.

Parameters

data	Container for serialized data

References IFEM::cout, ASMbase::getMinimumSize(), SIMbase::getName(), SIMbase::isRefined, isSaved, SIMbase::myModel, and ASMbase::write().

◆ setInitialCondition()

bool SIMinput::setInitialCondition	(	SIMdependency *	fieldHolder,
		const std::string &	fileName,
		const InitialCondVec &	info
	)

private

Sets initial conditions from a file.

Parameters

	fieldHolder	The SIM-object to inject the initial conditions into
[in]	fileName	Path to file to read the initial conditions from
[in]	info	Initial condition information

References SIMadmin::adm, ProcessAdm::broadcast(), ProcessAdm::dd, ASMbase::evaluate(), SIMdependency::getField(), HDF5Reader::getFieldSize(), SIMbase::getLocalPatchIndex(), SIMbase::getNoFields(), ASMbase::getNoNodes(), ProcessAdm::getProcId(), ASMbase::injectNodeVec(), DomainDecomposition::isPartitioned(), SIMbase::myModel, readPatch(), HDF5Reader::readString(), HDF5Reader::readVector(), and utl::vector< T >::size().

Referenced by setInitialConditions().

◆ setInitialConditions()

bool SIMinput::setInitialConditions ( SIMdependency * fieldHolder = nullptr )

Sets the initial conditions.

Parameters

fieldHolder The SIM-object to inject the initial conditions into, nullptr means this.

References SIMinput::ICInfo::basis, SIMinput::ICInfo::component, IFEM::cout, SIMinput::ICInfo::file_field, SIMinput::ICInfo::function, SIMdependency::getField(), myICs, utl::parseRealFunc(), SIMbase::project(), setInitialCondition(), and SIMinput::ICInfo::sim_field.

◆ setNeumann()

bool SIMinput::setNeumann	(	const std::string &	prop,
		const std::string &	type,
		int	ndir,
		int	code
	)

Defines a Neumann boundary condition property by parsing a string.

Parameters

[in]	prop	The string to parse the property definition from
[in]	type	Additional option defining the type of property definition
[in]	ndir	Direction of the surface traction on the Neumann boundary
[in]	code	The property code to be associated with this property

References SIMbase::getNoFields(), SIMbase::myScalars, SIMbase::myTracs, SIMbase::myVectors, SIMbase::nsd, utl::parseRealFunc(), utl::parseTracFunc(), utl::parseVecFunc(), and setPropertyType().

Referenced by parseBCTag().

◆ setPropertyType()

size_t SIMinput::setPropertyType	(	int	code,
		Property::Type	ptype,
		int	pindex = `-1`,
		char	basis = `1`
	)

Defines the type of a property set.

Parameters

[in]	code	The property code to be associated with the property type
[in]	ptype	The property type to be associated with the given code
[in]	pindex	0-based index into problem-dependent property container
[in]	basis	1-based index into basis associated with property

Negative values on pindex are used to flag the use of local axes for Dirichlet boundary conditions as follows: pindex=-2 : Compute local axes directions directly at the Greville points. pindex=-3 : Compute local axes directions by projecting the local tangent direction onto the spline basis, to obtain directions at control points.

References ASMbase::getNoParamDim(), SIMbase::getPatch(), LOCAL_AXES, LOCAL_PROJECTED, SIMbase::myModel, SIMbase::myProps, and SIMbase::preserveNOrder.

Referenced by parse(), parseBCTag(), parseMaterialSet(), setNeumann(), setTracProperty(), and setVecProperty().

◆ setTracProperty()

bool SIMinput::setTracProperty	(	int	code,
		Property::Type	ptype,
		TractionFunc *	field = `nullptr`
	)

Defines a traction field property.

Parameters

[in]	code	The property code to be associated with the property
[in]	ptype	The property type to be associated with the given code
[in]	field	The traction field representing the physical property

References SIMbase::myTracs, and setPropertyType().

◆ setVecProperty()

size_t SIMinput::setVecProperty	(	int	code,
		Property::Type	ptype,
		VecFunc *	field = `nullptr`,
		int	pflag = `-1`
	)

Defines a vector field property.

Parameters

[in]	code	The property code to be associated with the property
[in]	ptype	The property type to be associated with the given code
[in]	field	The vector field representing the physical property
[in]	pflag	Flag for local axis directions (see setPropertyType)

References SIMbase::myVectors, and setPropertyType().

The documentation for this class was generated from the following files:

src/SIM/SIMinput.h
src/SIM/SIMinput.C

Classes

Public Types

Public Member Functions

Protected Types

Protected Member Functions

Static Protected Member Functions

Protected Attributes

Private Member Functions

Private Attributes

Additional Inherited Members

Detailed Description

Member Function Documentation

◆ addConnection()

◆ connectPatches()

◆ createFEMmodel()

◆ createPropertySet()

◆ getFunctionsForElements()

◆ getModelGenerator()

◆ getPatchStream()

◆ getUniquePropertyCode()

◆ parse() [1/2]

◆ parse() [2/2]

◆ parseMaterialSet()

◆ parsePatchList()

◆ parsePeriodic()

◆ parseTopologySet()

◆ readNodes() [1/2]

◆ readNodes() [2/2]

◆ readPatch()

◆ readPatches()

◆ readTopologyOnly()

◆ refine() [1/4]

◆ refine() [2/4]

◆ refine() [3/4]

◆ refine() [4/4]

◆ restartBasis()

◆ restoreBasis()

◆ saveBasis()

◆ setInitialCondition()

◆ setInitialConditions()

◆ setNeumann()

◆ setPropertyType()

◆ setTracProperty()

◆ setVecProperty()